Issue Brave New World
Subtitle Look to the Skies
Date August 2006
Writer(s) AJ Lieberman
Artist(s) Al Barrionuevo, Bit
storyline J'onn, posing as DEO agent William Dyer, met a Mr. Ferguson in Arizona. He revealed himself and looked at an amulet the man had. It was a Kuru Pendant - a medallion like those given to Martians at their coming of age ceremony. 
He fought with himself over his purpose - Martian Manhunter won out over J'onn. He now believed there was another Martian on Earth.
Note: there are several other short stories in this book.

Issue Martian Manhunter 1 of 8
Subtitle The Others Among Us part 1
Date October 2006
Writer(s) AJ Lieberman
Artist(s) Al Barrionuevo, Bit
storyline As Martian Manhunter telepathically tracked the second Martian, so did a military group. The man who ran the lab where the Martian escaped from was killed for his negligence. MM was shot by a tracker robot as they neared the Martian. J'onn then realized the whole thing had been a trap - when he entered the room where he felt the Martian, someone spoke to him through a phone. They were the one's who'd been holding the Martian, and they asked him to join them. When he refused, he was hit with a psionic pulse. As he fell from the building, he came to the conclusion that the Martian's captors had been able to synthesize their power. 
He soon found the other - he'd been able to remove the tracking device. He said his name was Roh Kar. J'onn promised him he had nothing to worry about as he was shot from behind. As Roh Kar died, he told J'onn that there were others like them. He killed the Martian's killer.

Issue Martian Manhunter 2 of 8
Subtitle The Others Among Us part 2
Date November 2006
Writer(s) AJ Lieberman
Artist(s) Al Barrionuevo, Bit
storyline Believing the Martian Manhunter now telepathically had their location, the outfit which had the other captive Martian began evacuating the facility and dumping data. J'onn was already inside. He found several other Martians in suspended animation. Other Martians appeared to be in control of them. They questioned him about Roh'kar and how he'd been there (on Earth) for "many years." He convinced them they needed to leave the installation. When the soldiers arrived, J'onn was able to cloak himself and the other five Martians. He could not, however, stop them from entering the soldiers' minds and forcing them to kill each other.
Six weeks previous, the medallion had crashed into the Sonoran Desert. A scientist found it and could not trace it to any known element on Earth. Some time later, a woman claiming to be from NASA came snooping, but the man did not tell her about it. Once J'onn had secured it, he erased the man's memory of him and put him on a plane to London. It exploded during flight.  

Issue Martian Manhunter 3 of 8
Subtitle The Others Among Us part 3
Date December 2006
Writer(s) AJ Lieberman
Artist(s) Al Barrionuevo, Bit
storyline J'onn got the others to safety, but warned them he would only protect them if they let him and trusted him. There would be no more killing. 
J'onn learned that Alex Ferguson (the man who'd found the medallion) did not board the plane which was destroyed. The agency who'd had the Martians believed him to be dead, but sought out Dyer (J'onn), who they knew had spoken with him. Ferguson believed Dyer set him up. He made a recording for his girlfriend, Sara. On it, he told her about the medallion and Dyer. The agency found Ferguson when he entered Dyer's office. 
J'onn learned that the youngest of the Martians had known his daughter. They'd been off planet when the plague hit Mars.
The agency killed Ferguson while J'onn tried to protect him. He survived the napalm blast. He brought Superman, Batman, and Wonder Woman to the facility where the Martians had been held.
Homeland Security brought in Black Canary, Zatanna, Green Arrow, Vixen, and Green Lantern in hopes of stopping the Martian Manhunter. They were told that he was an enemy of the state after freeing several high-powered captives.

Issue Martian Manhunter 4 of 8
Subtitle The Others Among Us part 4
Date January 2007
Writer(s) AJ Lieberman
Artist(s) Al Barrionuevo, Bit
storyline The agency tested a weapon that would burn its victim alive from the inside. Alex's girlfriend found out he was dead. They said he'd set off a bomb in a building and took out three entire floors. She received the package he'd sent. The tape told her not to go back to her apartment.
J'onn continued to teach his new friends how to use human thought to change form and fit in better.
Sara called Dyer Investigations and got in touch with J'onn. She told him he'd killed her boyfriend and she was going to the news with the tape. He grabbed her up before the agency could and took her into hiding. The agency tracked them and helicopters fired on their building. One of the Martians was killed, the others flew away with the tape and Sara (Alex's girlfriend).

Issue Martian Manhunter 5 of 8
Subtitle The Others Among Us part 5
Date February 2007
Writer(s) AJ Lieberman
Artist(s) Al Barrionuevo, Bit
storyline J'onn took his fellow Martians (and Sara) to an abandoned housing development. J'onn headed back to reclaim the body of the friend they'd lost.
The agency believed one of their own might have gone rogue - a helicopter was shot down, but no body was found. J'onn had him captive. J'onn recovered the body, though it was a trap. He took it back to the housing development and showed the others. Their fallen comrade had been infected with the plague that wiped out their planet. 
The team approached by the DEO found J'onn. Vixen attempted to attack him, but she went right through him. The Martians won the battle with little injury.
Griggs, their captive, got free and found another green Martian in the woods nearby.

Issue Martian Manhunter 6 of 8
Subtitle The Others Among Us part 6
Date March 2007
Writer(s) AJ Lieberman
Artist(s) Al Barrionuevo, Bit
storyline FBI agents captured the woman (Rio) leading the DEO against the Martians. Alex Ferguson had been a STAR Labs employee. She was let go, and she met up with a man named Keane.
J'onn went to Batman. They both believed one of the Martians was killing humans. Batman refused to help him. J'onn returned home. Alfred, without Bruce's knowledge, gave J'onn the information he needed. J'onn then grabbed Keane, who was behind the transfer of someone named "Scortch." Superman intervened. He gave J'onn an hour to produce proof that the DEO had infected the Martians with something. 
Dal'en (the killer Martian) attacked J'onn and revealed himself as a white Martian.

Issue Martian Manhunter 7 of 8
Subtitle The Others Among Us part 7
Date April 2007
Writer(s) AJ Lieberman
Artist(s) Al Barrionuevo, Bit
storyline All the other Martians reverted to their true white form. J'onn was able to force Del'an and Telok'telar into comas. Mica'kel was killed after fighting J'onn in a mine. J'onn escaped before it exploded.
Rio was double-crossed. Her package was taken after she and her driver were killed. The shooter took the box back to Griggs (the rogue agent) and found it to be empty. Rio had been wearing a kevlar vest.
J'onn found Sara. She was with the last Martian when he freaked out and turned white. He realized that they had been as convinced as he was that they were green Martians. He went after Keane again only to find that he was truly human.

Issue Martian Manhunter 8 of 8
Subtitle The Others Among Us part 8
Date May 2007
Writer(s) AJ Lieberman
Artist(s) Al Barrionuevo, Bit
storyline Rio gave J'onn documentation proving Keane was behind everything. Keane never knew they weren't green Martians. J'onn kept him from committing suicide in front of them. He decided the papers would go public. 
J'onn went to Superman. He was convinced that there was another green Martian on Earth. He lured the last of the whites (Till'all) to him. He convinced him join him to find out who (or what) was behind the situation. J'onn entered the white Martian's mind. J'onn left him; Sara revealed herself as the other green Martian. She was out to get J'onn because he'd not killed his brother (who'd unleashed the plague on Mars).
J'onn introduced Till'all to the JLA.

Notes, references to time, and chronology:
This takes place after 52, as J'onn is in his true form throughout.
Also of note, 3 white Martians and one green (other than J'onn) are alive on Earth.

   
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